BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019F05SP1|AL427504
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1448 950 0.0
3x_Contig1416 459 e-129
>3x_Contig1448
Length = 10333
Score = 950 bits (476), Expect = 0.0
Identities = 483/490 (98%)
Strand = Plus / Minus
Query: 450 tcgaataagaacaagagcttggctatgcttcctgttattcaggcaaactcatatttwaga 509
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 10331 tcgaataagaacaagagcttggctatgcttcctgttattcaggcaaactcatatttaaga 10272
Query: 510 caataagggaatgaataacaactagaaacattttagttmtttamttmmmatagtattaag 569
|||||||||||||||||||||||||||||||||||||| |||| || |||||||||||
Sbjct: 10271 caataagggaatgaataacaactagaaacattttagttctttacttcccatagtattaag 10212
Query: 570 tccagttgcagccaagcaccactttctcagtacagtcttccacgataatgtttgttcgcg 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10211 tccagttgcagccaagcaccactttctcagtacagtcttccacgataatgtttgttcgcg 10152
Query: 630 tcctttttttttttttttctttctttctttttcggttcgtgtcaggaatgaagctctaaa 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10151 tcctttttttttttttttctttctttctttttcggttcgtgtcaggaatgaagctctaaa 10092
Query: 690 gaaacttcgcatggtcgaatcgagaaattcagaactgaagaaatcatgaaattcagagga 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10091 gaaacttcgcatggtcgaatcgagaaattcagaactgaagaaatcatgaaattcagagga 10032
Query: 750 tgagaaaccggtggatgatgttttaaaatagactttgatctgtaaggaacagacatttat 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10031 tgagaaaccggtggatgatgttttaaaatagactttgatctgtaaggaacagacatttat 9972
Query: 810 caagggaagcagaagaagagggataactggcaaataattggctagctggcaaatgggcga 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9971 caagggaagcagaagaagagggataactggcaaataattggctagctggcaaatgggcga 9912
Query: 870 agggcttatcaaattttaaacaaagaataacctaacctcacgtctgtsggtgaaaaagcg 929
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 9911 agggcttatcaaattttaaacaaagaataacctaacctcacgtctgtcggtgaaaaagcg 9852
Query: 930 ttaataaagg 939
||||||||||
Sbjct: 9851 ttaataaagg 9842
>3x_Contig1416
Length = 10161
Score = 459 bits (230), Expect = e-129
Identities = 230/230 (100%)
Strand = Plus / Minus
Query: 1 ggcgctgtatcaaaggatggacccagcgcaggcgctgcaatatccttagcaatcctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ggcgctgtatcaaaggatggacccagcgcaggcgctgcaatatccttagcaatcctttct 183
Query: 61 tgcgctttgaagagacctgtttctcctaaactctgtatgacgggggagataacgcttcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tgcgctttgaagagacctgtttctcctaaactctgtatgacgggggagataacgcttcga 123
Query: 121 ggtaagatcttgcctatcggtggaatcaaagagaaactattgggggcacaattttaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ggtaagatcttgcctatcggtggaatcaaagagaaactattgggggcacaattttaccac 63
Query: 181 atgaatcacgtcctagtaccctcggctaacctatctgacgttgttcaagc 230
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atgaatcacgtcctagtaccctcggctaacctatctgacgttgttcaagc 13
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,145
Number of Sequences: 1807
Number of extensions: 16145
Number of successful extensions: 2448
Number of sequences better than 1.0e-20: 2
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)